Type: Package
Package: SCpubr
Title: Generate Publication Ready Visualizations of Single Cell
        Transcriptomics Data
Version: 3.0.1
Authors@R: 
    person("Enrique", "Blanco-Carmona", , "scpubr@gmail.com", role = c("cre", "aut"),
           comment = c(ORCID = "0000-0002-1208-1691"))
Description: A system that provides a streamlined way of generating
        publication ready plots for known Single-Cell transcriptomics
        data in a “publication ready” format. This is, the goal is to
        automatically generate plots with the highest quality possible,
        that can be used right away or with minimal modifications for a
        research article.
License: GPL-3
URL: https://github.com/enblacar/SCpubr/,
        https://enblacar.github.io/SCpubr-book/
BugReports: https://github.com/enblacar/SCpubr/issues/
Depends: R (>= 4.0.0)
Suggests: assertthat, circlize, cli, cluster, colorspace,
        ComplexHeatmap, covr, decoupleR, dplyr (>= 1.1.0), enrichplot,
        forcats, ggalluvial (>= 0.12.5), ggbeeswarm, ggdist, ggExtra,
        ggh4x, ggplot2 (>= 3.4.0), ggplotify, ggrastr, ggrepel,
        ggridges, ggsignif, graphics, infercnv, KernSmooth, knitr,
        labeling, magrittr, MASS, Matrix, methods, Nebulosa,
        org.Hs.eg.db, patchwork, pheatmap, plyr, purrr, qpdf,
        RColorBrewer, rjags, rlang, rmarkdown, scales, scattermore,
        Seurat, SeuratObject, sf, stringr, svglite, testthat (>=
        3.0.0), tibble, tidyr, UCell, viridis, withr
VignetteBuilder: knitr
biocViews: Software, SingleCell, Visualization
Config/testthat/edition: 3
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Repository: https://enblacar.r-universe.dev
Date/Publication: 2026-03-02 09:25:10 UTC
RemoteUrl: https://github.com/enblacar/scpubr
RemoteRef: HEAD
RemoteSha: a3ae2999ce50f32b96a68664f1880faafe94f01e
NeedsCompilation: no
Packaged: 2026-06-13 08:05:50 UTC; root
Author: Enrique Blanco-Carmona [cre, aut] (ORCID:
    <https://orcid.org/0000-0002-1208-1691>)
Maintainer: Enrique Blanco-Carmona <scpubr@gmail.com>